RuntimeWarning: compiletime version 3.5 of module 'tensorflow.python.framework.fast_tensor_util' does not match runtime version 3.6 #14273

stnatter · 2017-11-06T06:56:52Z

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System information

Have I written custom code (as opposed to using a stock example script provided in TensorFlow):
OS Platform and Distribution (e.g., Linux Ubuntu 16.04):
macOS High Sierra 10.13.1
TensorFlow installed from (source or binary):
pip3 install tensor flow
TensorFlow version (use command below):
1.4.0
Python version:
3.6.3
Bazel version (if compiling from source):
GCC/Compiler version (if compiling from source):
GCC: stable 7.2.0
CUDA/cuDNN version:
GPU model and memory:
Exact command to reproduce:
python3 -c "import tensorflow as tf; print(tf.GIT_VERSION, tf.VERSION)"

You can collect some of this information using our environment capture script:

https://github.com/tensorflow/tensorflow/tree/master/tools/tf_env_collect.sh

You can obtain the TensorFlow version with

python -c "import tensorflow as tf; print(tf.GIT_VERSION, tf.VERSION)"

Describe the problem

Error after install Tensorflow:

python3 -c "import tensorflow as tf; print(tf.GIT_VERSION, tf.VERSION)"

/usr/local/Cellar/python3/3.6.3/Frameworks/Python.framework/Versions/3.6/lib/python3.6/importlib/_bootstrap.py:219: RuntimeWarning: compiletime version 3.5 of module 'tensorflow.python.framework.fast_tensor_util' does not match runtime version 3.6
return f(*args, **kwds)
v1.4.0-rc1-11-g130a514 1.4.0

getting this and ONE MORE error when running:
python3 -c "import keras; print (keras.version)"
Using TensorFlow backend.
/usr/local/Cellar/python3/3.6.3/Frameworks/Python.framework/Versions/3.6/lib/python3.6/importlib/_bootstrap.py:219: RuntimeWarning: compiletime version 3.5 of module 'tensorflow.python.framework.fast_tensor_util' does not match runtime version 3.6
return f(*args, **kwds)
2017-11-06 15:12:09.361728: I tensorflow/core/platform/cpu_feature_guard.cc:137] Your CPU supports instructions that this TensorFlow binary was not compiled to use: SSE4.1 SSE4.2 AVX AVX2 FMA
2.0.9

Source code / logs

Include any logs or source code that would be helpful to diagnose the problem. If including tracebacks, please include the full traceback. Large logs and files should be attached. Try to provide a reproducible test case that is the bare minimum necessary to generate the problem.

asimshankar · 2017-11-06T08:26:17Z

Closing this as a duplicate of #14182

theminingengineer · 2017-11-12T14:55:19Z

HI, am having the same issue.... any one with a solution?

pau-lo · 2017-11-14T05:30:24Z

I am also having the same problem:

Using TensorFlow backend.
/Users/Create/.pyenv/versions/3.6.3/lib/python3.6/importlib/_bootstrap.py:219: RuntimeWarning: compiletime version 3.5 of module 'tensorflow.python.framework.fast_tensor_util' does not match runtime version 3.6
return f(*args, **kwds)

stnatter · 2017-11-14T07:23:13Z

https://github.com/lakshayg/tensorflow-build
this guy can help.

pau-lo · 2017-11-16T02:47:10Z

Thank you! @SteffenNa

elfxwt · 2017-11-29T02:03:19Z

I have met the same issue with python3 in virtualenv

vkumarcisco · 2017-12-01T07:55:02Z

Thank you @SteffenNa

drewszurko · 2017-12-08T06:46:30Z

Thanks @SteffenNa

For anyone else, the "macOS Sierra" build worked on my macOS High Sierra 10.13.1

sshadmand · 2017-12-16T09:02:49Z

+1 to @drewszurko and @SteffenNa

Better to use Sierra (1.4.0) on High Sierra than what is marked High Sierra (1.4.1):

pip install --ignore-installed --upgrade "https://github.com/lakshayg/tensorflow-build/raw/master/tensorflow-1.4.0-cp36-cp36m-macosx_10_12_x86_64.whl"

cloudtrends · 2017-12-26T02:15:01Z

Thank you! @SteffenNa

erickrf · 2017-12-27T19:09:19Z

@sshadmand I installed the High Sierra build on High Sierra with no problems (running macOS version 10.13.2)

brifordwylie · 2017-12-27T19:44:28Z

@SteffenNa suggestion is the solution (at least for me). Just go to https://github.com/lakshayg/tensorflow-build click on the on wheel you want and then on the download button right click and copy link address and paste into your pip line... e.g.

$  pip install --upgrade https://github.com/lakshayg/tensorflow-build/raw/master/tensorflow-1.4.1-cp36-cp36m-macosx_10_13_x86_64.whl

Worked great and fixed the warning about mismatched version.

theminingengineer · 2017-12-27T19:52:30Z

worked perfectl for me on : OSX High Sierra

…

On Wed, Dec 27, 2017 at 8:48 PM, Brian Wylie ***@***.***> wrote: @SteffenNa <https://github.com/steffenna> suggestion is the solution (at least for me). Just go to https://github.com/lakshayg/tensorflow-build click on the on wheel you want and then on the download button right click and copy link address and paste into your pip line... e.g. $ pip install --upgrade https://github.com/lakshayg/tensorflow-build/raw/master/tensorflow-1.4.1-cp36-cp36m-macosx_10_13_x86_64.whl Worked great and fixed the warning about mismatched version. — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#14273 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ALQBzZjyWU3o1J2vGWINnZsJYjrh1PtYks5tEp75gaJpZM4QSzht> .

skyrmion · 2018-01-03T21:18:13Z

https://github.com/lakshayg/tensorflow-build/raw/master/tensorflow-1.4.0-cp36-cp36m-linux_x86_64.whl
(ubuntu version) works for current Opensuse Tumbleweed

KyleTheNewbie · 2018-01-10T09:49:06Z

how about for RHEL7?

aykutyararbas · 2018-01-19T18:53:42Z

Worked perfect , Thanks.

marcelohenrique180 · 2018-01-20T23:24:09Z

@KyleTheNewbie I've installed with

pip install https://github.com/mind/wheels/releases/download/tf1.3-cpu/tensorflow-1.3.0-cp36-cp36m-linux_x86_64.whl

on Fedora and it seems good

hpeiyan · 2018-01-26T06:56:20Z

@SteffenNa correct. It's work. Thanks

informixx · 2018-01-26T16:36:01Z

Using
macOS 10.13.2 (17C88)
Kernel-Version: Darwin 17.3.0

Why do I get the following error? What to do?

Last login: Fri Jan 26 17:25:23 on ttys000

$ pip install --ignore-installed --upgrade "https://github.com/lakshayg/tensorflow-build/raw/master/tensorflow-1.4.0-cp36-cp36m-macosx_10_12_x86_64.whl"
Collecting tensorflow==1.4.0 from https://github.com/lakshayg/tensorflow-build/raw/master/tensorflow-1.4.0-cp36-cp36m-macosx_10_12_x86_64.whl
Using cached https://github.com/lakshayg/tensorflow-build/raw/master/tensorflow-1.4.0-cp36-cp36m-macosx_10_12_x86_64.whl
Collecting six>=1.10.0 (from tensorflow==1.4.0)
Using cached six-1.11.0-py2.py3-none-any.whl
Collecting enum34>=1.1.6 (from tensorflow==1.4.0)
Using cached enum34-1.1.6-py3-none-any.whl
Collecting wheel>=0.26 (from tensorflow==1.4.0)
Using cached wheel-0.30.0-py2.py3-none-any.whl
Collecting protobuf>=3.3.0 (from tensorflow==1.4.0)
Using cached protobuf-3.5.1-py2.py3-none-any.whl
Collecting numpy>=1.12.1 (from tensorflow==1.4.0)
Using cached numpy-1.14.0-cp36-cp36m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl
Collecting tensorflow-tensorboard<0.5.0,>=0.4.0rc1 (from tensorflow==1.4.0)
Using cached tensorflow_tensorboard-0.4.0-py3-none-any.whl
Collecting setuptools (from protobuf>=3.3.0->tensorflow==1.4.0)
Using cached setuptools-38.4.0-py2.py3-none-any.whl
Collecting html5lib==0.9999999 (from tensorflow-tensorboard<0.5.0,>=0.4.0rc1->tensorflow==1.4.0)
Collecting markdown>=2.6.8 (from tensorflow-tensorboard<0.5.0,>=0.4.0rc1->tensorflow==1.4.0)
Using cached Markdown-2.6.11-py2.py3-none-any.whl
Collecting werkzeug>=0.11.10 (from tensorflow-tensorboard<0.5.0,>=0.4.0rc1->tensorflow==1.4.0)
Using cached Werkzeug-0.14.1-py2.py3-none-any.whl
Collecting bleach==1.5.0 (from tensorflow-tensorboard<0.5.0,>=0.4.0rc1->tensorflow==1.4.0)
Using cached bleach-1.5.0-py2.py3-none-any.whl
Installing collected packages: six, enum34, wheel, setuptools, protobuf, numpy, html5lib, markdown, werkzeug, bleach, tensorflow-tensorboard, tensorflow
Exception:
Traceback (most recent call last):
File "/usr/local/lib/python3.6/site-packages/pip/basecommand.py", line 215, in main
status = self.run(options, args)
File "/usr/local/lib/python3.6/site-packages/pip/commands/install.py", line 342, in run
prefix=options.prefix_path,
File "/usr/local/lib/python3.6/site-packages/pip/req/req_set.py", line 784, in install
**kwargs
File "/usr/local/lib/python3.6/site-packages/pip/req/req_install.py", line 851, in install
self.move_wheel_files(self.source_dir, root=root, prefix=prefix)
File "/usr/local/lib/python3.6/site-packages/pip/req/req_install.py", line 1064, in move_wheel_files
isolated=self.isolated,
File "/usr/local/lib/python3.6/site-packages/pip/wheel.py", line 345, in move_wheel_files
clobber(source, lib_dir, True)
File "/usr/local/lib/python3.6/site-packages/pip/wheel.py", line 323, in clobber
shutil.copyfile(srcfile, destfile)
File "/usr/local/Cellar/python3/3.6.3/Frameworks/Python.framework/Versions/3.6/lib/python3.6/shutil.py", line 121, in copyfile
with open(dst, 'wb') as fdst:
PermissionError: [Errno 13] Permission denied: '/usr/local/lib/python3.6/site-packages/six.py'

erickrf · 2018-01-26T16:52:43Z

@informixx you don't have permission to write to the python installation. You should run sudo pip install ...

informixx · 2018-01-26T17:01:16Z

@erickrf Thx, for your quick answer!

Of course that's the solution and I've learned something :-)

But, poorly that fix does not help, I still got this error:

/Users/hamburg/PycharmProjects/Linear Regression Example/venv/lib/python3.6/importlib/_bootstrap.py:219: RuntimeWarning: compiletime version 3.5 of module 'tensorflow.python.framework.fast_tensor_util' does not match runtime version 3.6
return f(*args, **kwds)
/Users/hamburg/PycharmProjects/Linear Regression Example/venv/lib/python3.6/site-packages/h5py/init.py:36: FutureWarning: Conversion of the second argument of issubdtype from float to np.floating is deprecated. In future, it will be treated as np.float64 == np.dtype(float).type.
from ._conv import register_converters as _register_converters
Traceback (most recent call last):
File "/Users/hamburg/Library/Preferences/PyCharmCE2017.3/scratches/Linear_Regression_Example.py", line 6, in
import matplotlib.pyplot as plt
File "/Users/hamburg/PycharmProjects/Linear Regression Example/venv/lib/python3.6/site-packages/matplotlib/pyplot.py", line 116, in
_backend_mod, new_figure_manager, draw_if_interactive, _show = pylab_setup()
File "/Users/hamburg/PycharmProjects/Linear Regression Example/venv/lib/python3.6/site-packages/matplotlib/backends/init.py", line 60, in pylab_setup
[backend_name], 0)
File "/Users/hamburg/PycharmProjects/Linear Regression Example/venv/lib/python3.6/site-packages/matplotlib/backends/backend_macosx.py", line 17, in
from matplotlib.backends import _macosx
RuntimeError: Python is not installed as a framework. The Mac OS X backend will not be able to function correctly if Python is not installed as a framework. See the Python documentation for more information on installing Python as a framework on Mac OS X. Please either reinstall Python as a framework, or try one of the other backends. If you are using (Ana)Conda please install python.app and replace the use of 'python' with 'pythonw'. See 'Working with Matplotlib on OSX' in the Matplotlib FAQ for more information.

carljunepiao · 2018-01-30T20:39:14Z

What if I have: Python 3.6.4 :: Anaconda custom (64-bit), does Anaconda custom affect any upgrade installation?

welp, I'll try it now.

carljunepiao · 2018-01-30T20:43:59Z

NVM it works.

nickpoulos · 2018-02-04T19:14:30Z

Any suggestions on what to try with this environment? I can't seem to find a TF build on that link above ^ for an exact match to my system, but upgrading some of this stuff seems fairly complex.

macOS Sierra
Apple LLVM version 9.0.0 (clang-900.0.37)
Python 3.6.1 :: Anaconda custom (64-bit)
TensorFlow v1.4.0-rc1-11-g130a514 1.4.0

Thanks for your help.

enriqueb721 · 2018-04-02T15:59:14Z

It works for pip with:
pip install --upgrade pip

Or maybe you can execute if you use conda:
conda install tensorflow

yuseferi · 2018-04-03T09:43:46Z

on Mac OS High Seirra the following worked for me

pip install --ignore-installed --upgrade "https://github.com/lakshayg/tensorflow-build/raw/master/tensorflow-1.5.0-cp36-cp36m-macosx_10_13_x86_64.whl"

DAHEECHOI1208 · 2018-04-10T11:50:31Z

@SteffenNa Thank you :)

benedictchen · 2018-05-11T16:24:25Z

tensorflow-1.5.0-cp36-cp36m-macosx_10_13_x86_64.whl is not a supported wheel on this platform.

animaleja32 · 2018-05-23T21:39:15Z

@benedictchen I'm getting the same error

monktastic · 2018-07-12T17:28:24Z

@benedictchen @animaleja32 Are you using a wheel that matches your Python version?

ChenKunMiner · 2018-09-17T02:14:13Z

take the right version of this @SteffenNa ,and i resolve it. thx

yuanjun · 2018-09-20T19:56:05Z

@zhilevan thanks for your suggestion, works one my Mac

rakshitsareen · 2018-09-29T04:34:58Z

Facing the same issue on Mojave.
Any solution ?
python -c "import tensorflow as tf; print(tf.version)"
/Users/rakshitsareen/venv/lib/python3.7/importlib/_bootstrap.py:219: RuntimeWarning: compiletime version 3.6 of module 'tensorflow.python.framework.fast_tensor_util' does not match runtime version 3.7

Beenhakker · 2019-01-09T22:07:04Z

When using pyenv, omit the "--user", so in my case: pip install --ignore-installed --upgrade "Download URL"

If you already ran the command, you can "rm -rf ~/.local" to cleanup your mess on OSX :)
"pip --user" reference: https://docs.python.org/3.7/library/site.html

@rakshitsareen That's the whole purpose of this issue, so read carefully from the top.

asimshankar closed this as completed Nov 6, 2017

roy7 mentioned this issue Dec 31, 2017

Tech support for tensorflow, cuda, training/tf/parse.py setup leela-zero/leela-zero#524

Closed

jakirkham mentioned this issue Jan 31, 2018

tensorflow warning compile time version vs runtime version conda-forge/tensorflow-feedstock#49

Closed

DOsinga mentioned this issue Aug 12, 2018

Tensorflow and Python runtime version incompatability DOsinga/deep_learning_cookbook#7

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RuntimeWarning: compiletime version 3.5 of module 'tensorflow.python.framework.fast_tensor_util' does not match runtime version 3.6 #14273

RuntimeWarning: compiletime version 3.5 of module 'tensorflow.python.framework.fast_tensor_util' does not match runtime version 3.6 #14273

stnatter commented Nov 6, 2017 •

edited

asimshankar commented Nov 6, 2017

theminingengineer commented Nov 12, 2017

pau-lo commented Nov 14, 2017

stnatter commented Nov 14, 2017

pau-lo commented Nov 16, 2017

elfxwt commented Nov 29, 2017

vkumarcisco commented Dec 1, 2017

drewszurko commented Dec 8, 2017

sshadmand commented Dec 16, 2017 •

edited

cloudtrends commented Dec 26, 2017

erickrf commented Dec 27, 2017

brifordwylie commented Dec 27, 2017

theminingengineer commented Dec 27, 2017 via email

skyrmion commented Jan 3, 2018

KyleTheNewbie commented Jan 10, 2018

aykutyararbas commented Jan 19, 2018

marcelohenrique180 commented Jan 20, 2018

hpeiyan commented Jan 26, 2018

informixx commented Jan 26, 2018 •

edited

erickrf commented Jan 26, 2018

informixx commented Jan 26, 2018 •

edited

carljunepiao commented Jan 30, 2018 •

edited

carljunepiao commented Jan 30, 2018

nickpoulos commented Feb 4, 2018

enriqueb721 commented Apr 2, 2018

yuseferi commented Apr 3, 2018

DAHEECHOI1208 commented Apr 10, 2018

benedictchen commented May 11, 2018

animaleja32 commented May 23, 2018

monktastic commented Jul 12, 2018

ChenKunMiner commented Sep 17, 2018

yuanjun commented Sep 20, 2018

rakshitsareen commented Sep 29, 2018

Beenhakker commented Jan 9, 2019

RuntimeWarning: compiletime version 3.5 of module 'tensorflow.python.framework.fast_tensor_util' does not match runtime version 3.6 #14273

RuntimeWarning: compiletime version 3.5 of module 'tensorflow.python.framework.fast_tensor_util' does not match runtime version 3.6 #14273

Comments

stnatter commented Nov 6, 2017 • edited

System information

Describe the problem

Source code / logs

asimshankar commented Nov 6, 2017

theminingengineer commented Nov 12, 2017

pau-lo commented Nov 14, 2017

stnatter commented Nov 14, 2017

pau-lo commented Nov 16, 2017

elfxwt commented Nov 29, 2017

vkumarcisco commented Dec 1, 2017

drewszurko commented Dec 8, 2017

sshadmand commented Dec 16, 2017 • edited

cloudtrends commented Dec 26, 2017

erickrf commented Dec 27, 2017

brifordwylie commented Dec 27, 2017

theminingengineer commented Dec 27, 2017 via email

skyrmion commented Jan 3, 2018

KyleTheNewbie commented Jan 10, 2018

aykutyararbas commented Jan 19, 2018

marcelohenrique180 commented Jan 20, 2018

hpeiyan commented Jan 26, 2018

informixx commented Jan 26, 2018 • edited

erickrf commented Jan 26, 2018

informixx commented Jan 26, 2018 • edited

carljunepiao commented Jan 30, 2018 • edited

carljunepiao commented Jan 30, 2018

nickpoulos commented Feb 4, 2018

enriqueb721 commented Apr 2, 2018

yuseferi commented Apr 3, 2018

DAHEECHOI1208 commented Apr 10, 2018

benedictchen commented May 11, 2018

animaleja32 commented May 23, 2018

monktastic commented Jul 12, 2018

ChenKunMiner commented Sep 17, 2018

yuanjun commented Sep 20, 2018

rakshitsareen commented Sep 29, 2018

Beenhakker commented Jan 9, 2019

stnatter commented Nov 6, 2017 •

edited

sshadmand commented Dec 16, 2017 •

edited

informixx commented Jan 26, 2018 •

edited

informixx commented Jan 26, 2018 •

edited

carljunepiao commented Jan 30, 2018 •

edited