Cannot remove entries from nonexistent #622

vinhqdang · 2015-12-26T09:14:16Z

Hello everyone

I am using Anaconda on Mac OS 10.11

I created a new environment with anaconda

conda create -n tensorflow python

Then tried to install tensorflow

pip install --upgrade https://storage.googleapis.com/tensorflow/mac/tensorflow-0.6.0-py2-none-any.whl

but I faced an error

Installing collected packages: six, setuptools, protobuf, numpy, tensorflow
  Found existing installation: setuptools 19.1.1
**Cannot remove entries from nonexistent file /Users/qdang/anaconda/envs/tensorflow/lib/python2.7/site-packages/easy-install.pth**

How could I install tensorflow with anaconda python 2.7?

Btw, I have CUDA 3.0 (Nvidia 750M) with my Macbook? How could I utilize its power other than running only on CPU mode?

Thanks,

vinhqdang · 2015-12-26T09:18:49Z

The solution is posted here

#135

It is for tensorflow 0.5.0 but still works with version 0.6.0

sunformoon · 2015-12-30T06:13:12Z

Hi, I followed the solution in the provided linking by downloading .whl file manually ( https://storage.googleapis.com/tensorflow/mac/tensorflow-0.6.0-py2-none-any.whl ) and run $pip install tensorflow-0.6.0-py2-none-any.whl.

And install the latest tensorflow by $ pip install --upgrade https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-0.6.0-cp27-none-linux_x86_64.whl

However, the issue still comes out:
Found existing installation: setuptools 19.1.1
Cannot remove entries from nonexistent file...

Could you please give more detailed solution when you solved the 'nonexistent' issue? Thanks a lot!

vinhqdang · 2015-12-30T06:17:09Z

Hi

It works for me (in Mac OS 10.11). Hope it helps

http://vinhdq.blogspot.com/2015/12/installing-tensorflow-on-mac-os-1011.html http://vinhdq.blogspot.com/2015/12/installing-tensorflow-on-mac-os-1011.html
—
Best Regards

Vinh DANG

On 30 Dec 2015, at 07:14, Zhuotun Zhu notifications@github.com wrote:

Hi, I followed the solution in the provided linking by downloading .whl file manually ( https://storage.googleapis.com/tensorflow/mac/tensorflow-0.6.0-py2-none-any.whl https://storage.googleapis.com/tensorflow/mac/tensorflow-0.6.0-py2-none-any.whl ) and run $pip install tensorflow-0.6.0-py2-none-any.whl.

And install the latest tensorflow by $ pip install --upgrade https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-0.6.0-cp27-none-linux_x86_64.whl https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-0.6.0-cp27-none-linux_x86_64.whl
However, the issue still comes out:
Found existing installation: setuptools 19.1.1
Cannot remove entries from nonexistent file...

Could you please give more detailed solution when you solved the 'nonexistent' issue? Thanks a lot!

—
Reply to this email directly or view it on GitHub #622 (comment).

sunformoon · 2015-12-30T06:30:31Z

I actually have installed Tensorflow 0.6.0 successfully on Ubuntu 14.04.
I am wondering how to solve the "Found existing installation: setuptools 19.1.1 Cannot remove entries from nonexistent file" issue. Maybe it worked for you but not me due to the different OS?

vinhqdang · 2015-12-30T06:55:27Z

Hi

How did you install tensor flow?

I faced a same problem when I installed with pip, but after I created a totally new environment there is no issue.
—
Best Regards

Vinh DANG

On 30 Dec 2015, at 07:31, Zhuotun Zhu notifications@github.com wrote:

I actually have installed Tensorflow 0.6.0 successfully on Ubuntu 14.04.
I am wondering how to solve the "Found existing installation: setuptools 19.1.1 Cannot remove entries from nonexistent file" issue. Maybe it worked for you but not me due to the different OS?

—
Reply to this email directly or view it on GitHub #622 (comment).

sunformoon · 2015-12-30T07:05:05Z

Hi, I installed the tensorflow on Ubuntu 14.04 as following:

$ conda install virtualenv
$ conda create --name=tensorflow_env python=2.7
$ source activate tensorflow_env
$ pip install --upgrade https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-0.5.0-cp27-none-linux_x86_64.whl

Then I updated to the 0.6.0 version. Although there is still the nonexistent issue, I tested the tensorflow successfully on MNIST demo. I think the issue is just somehow a warning that may not affect the use of tensorflow at present. However, it's better to solve it.

vinhqdang · 2015-12-30T07:07:49Z

Why do you need to install version 0.5.0 then upgrade. Maybe it’s better to install 0.6.0 directly?

—
Best Regards

Vinh DANG

On 30 Dec 2015, at 08:06, Zhuotun Zhu notifications@github.com wrote:

Hi, I installed the tensorflow on Ubuntu 14.04 as following:

$ conda install virtualenv
$ conda create --name=tensorflow_env python=2.7
$ source activate tensorflow_env
$ pip install --upgrade https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-0.5.0-cp27-none-linux_x86_64.whl https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-0.5.0-cp27-none-linux_x86_64.whl
Then I updated to the 0.6.0 version. Although there is still the nonexistent issue, I tested the tensorflow successfully on MNIST demo. I think the issue is just somehow a warning that may not affect the use of tensorflow at present. However, it's better to solve it.

—
Reply to this email directly or view it on GitHub #622 (comment).

sunformoon · 2015-12-30T07:30:18Z

Hi,
Cause the instruction on homepage of Virtualenv installation is the 0.5.0 version. I didn't notice the latest 0.6.0 version. After I installed, I was informed from other source that maybe I could update to the 0.6.0 version. However, the nonexistent issue comes out both on my installation of 0.5.0 and 0.6.0.

vinhqdang · 2015-12-30T07:33:43Z

Well

I have no idea about Ubuntu environment.

However, I could suggest you try (nothing to lose LOL):

create a new environment with conda (using sklearn environment instead of pure python)
install tensor flow 0.6.0 offline.
—
Best Regards

Vinh DANG

On 30 Dec 2015, at 08:31, Zhuotun Zhu notifications@github.com wrote:

Hi,
Cause the instruction on homepage of Virtualenv installation is the 0.5.0 version. I didn't notice the latest 0.6.0 version. After I installed, I was informed from other source that maybe I could update to the 0.6.0 version. However, the nonexistent issue comes out both on my installation of 0.5.0 and 0.6.0.

—
Reply to this email directly or view it on GitHub #622 (comment).

osdf · 2016-01-06T22:19:05Z

See here: pypa/pip#2751.
Possible work-around: pip install --upgrade --I setuptools

frankcarey · 2016-01-10T04:03:34Z

@osdf - yeah I hit this too. Used the following to solve it when using conda (after I already successfully installed using the ubuntu pip directly) so that I had iPython notebook (Jupyter) installed.

List conda environments
$ conda env list

Enable a conda environment..
$ source activate [your env or root]

check python..
$ which python
.. this should be something like ~/anaconda2/bin/python

$ pip install --upgrade https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-0.6.0-cp27-none-linux_x86_64.whl

.. got the error above, so added the --ignore-installed flag per pypa/pip#2751

$ pip install --upgrade https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-0.6.0-cp27-none-linux_x86_64.whl --ignore-installed

.. everything was successful..

$ python
>>> import tensorflow

.. success and back in business!

naim · 2016-01-14T16:03:20Z

Thanks @frankcarey for posting your workaround.

inoryy · 2016-01-21T07:16:57Z

Had same error with Python 3.4 version, solution by @frankcarey worked, thanks!

kli-casia · 2016-02-20T02:43:16Z

@frankcarey
I use your workaround and successfully installed tensorflow
But when I import it, there is something wrong.

---------------------------------------------------------------------------
ImportError                               Traceback (most recent call last)
<ipython-input-1-a649b509054f> in <module>()
----> 1 import tensorflow

/public/home/kli/anaconda/envs/tensorflow/lib/python2.7/site-packages/tensorflow/__init__.py in <module>()
     21 from __future__ import print_function
     22
---> 23 from tensorflow.python import *

/public/home/kli/anaconda/envs/tensorflow/lib/python2.7/site-packages/tensorflow/python/__init__.py in <module>()
     39 please exit the tensorflow source tree, and relaunch your python interpreter
     40 from there.""" % traceback.format_exc()
---> 41   raise ImportError(msg)
     42
     43 from tensorflow.core.framework.summary_pb2 import *

ImportError: Traceback (most recent call last):
  File "/public/home/kli/anaconda/envs/tensorflow/lib/python2.7/site-packages/tensorflow/python/__init__.py", line 35, in <module>
    from tensorflow.core.framework.graph_pb2 import *
  File "/public/home/kli/anaconda/envs/tensorflow/lib/python2.7/site-packages/tensorflow/core/framework/graph_pb2.py", line 6, in <module>
    from google.protobuf import descriptor as _descriptor
  File "/public/home/kli/anaconda/envs/tensorflow/lib/python2.7/site-packages/google/protobuf/descriptor.py", line 46, in <module>
    from google.protobuf.pyext import _message
ImportError: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by /public/home/kli/anaconda/envs/tensorflow/lib/python2.7/site-packages/google/protobuf/pyext/_message.so)


Error importing tensorflow.  Unless you are using bazel,
you should not try to import tensorflow from its source directory;
please exit the tensorflow source tree, and relaunch your python interpreter
from there.

yhuanghamu · 2016-03-09T00:56:20Z

@kli-nlpr Did you figure out the GLIBC_2.14 problem?

kli-casia · 2016-03-09T01:27:00Z

@StevenHuang4321
I use centos6 when encounter this problem.
When I use Ubuntu14.04, the problem goes away.

yhuanghamu · 2016-03-09T01:35:14Z

Since our server use Centos 6, it is not possible for me to change to
ubuntu. Thanks.

On Tue, Mar 8, 2016 at 5:28 PM, Kai Li notifications@github.com wrote:

@StevenHuang4321 https://github.com/StevenHuang4321

I use centos6 when encounter this problem.
When I use Ubuntu14.04, the problem goes away.

—
Reply to this email directly or view it on GitHub
#622 (comment)
.

kli-casia · 2016-03-09T01:40:08Z

@StevenHuang4321
The possible solution is to update your glibc version.
But I think this is a complicated task and dangerous...

In fact I encounter a lot of problem when I use centos6 while doing deep learning research.
After change to Ubuntu, life becomes much easier.

yhuanghamu · 2016-03-09T01:47:51Z

Our system is CentOS 6.7, but it seems that only CentOS 7 supprot glib_2.14
or higher version.

Apparently, CentOS is not a good linux distribution to do develop and
research.

I already suggest my advisor to migrate our server from CentOS6.7 to Ubuntu
server.

On Tue, Mar 8, 2016 at 5:41 PM, Kai Li notifications@github.com wrote:

@StevenHuang4321 https://github.com/StevenHuang4321
The possible solution is to update your glibc version.
But I think this is a complicated task and dangerous...

In fact I encounter a lot of problem when I use centos6 while doing deep
learning research.

—
Reply to this email directly or view it on GitHub
#622 (comment)
.

fengmei · 2016-03-18T22:04:25Z

solution works, thanks!

ppuliu · 2016-04-01T05:31:52Z

Another solution

pip install --ignore-installed --upgrade https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-0.7.1-cp27-none-linux_x86_64.whl

bzamecnik · 2016-04-10T21:43:45Z

Observed on Ubuntu 15.10 Server in Anaconda 4.0.0 with python 3.4, tensorflow-0.7.1-cp34-none-linux_x86_64.whl GPU. Downloading and installing from local file works!

wuyanghere · 2016-06-06T10:38:43Z

@osdf
thanks for your solution!
it works
pip install --upgrade -I setuptools

geyang · 2016-08-08T05:29:15Z

Both solutions worked for me:
1.

pip install --ignore-installed --upgrade https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-0.7.1-cp27-none-linux_x86_64.whl

pip install --upgrade -I setuptools

export TF_BINARY_URL=https://storage.googleapis.com/tensorflow/mac/gpu/tensorflow-0.10.0rc0-py3-none-any.whl
sudo pip3 install --upgrade $TF_BINARY_URL

sudo python3 -m pip install --upgrade https://storage.googleapis.com/tensorflow/mac/protobuf-3.0.0b2.post2-cp35-none-any.whl

brando90 · 2016-09-13T21:21:41Z

just as a comment...I accidentally downloaded the MAC version in linux because the --ignore-installed allowed me. So if it still doesn't work that might be it.

ghost · 2016-10-13T04:56:24Z

1.download ez_setup.py
2.run script >python ez_setup.py
It works for me (in windows 7)

vinhqdang closed this as completed Dec 26, 2015

jaraco mentioned this issue Jun 10, 2016

pip update to 22.x fails pypa/setuptools#605

Closed

johnyf mentioned this issue Jun 26, 2016

Version in setup and use gitpython tulip-control/tulip-control#145

Merged

rouseguy mentioned this issue Jul 12, 2016

pip install of tensorflow doesn't seem to work rouseguy/DeepLearning-Image#2

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Cannot remove entries from nonexistent #622

Cannot remove entries from nonexistent #622

vinhqdang commented Dec 26, 2015

vinhqdang commented Dec 26, 2015

sunformoon commented Dec 30, 2015

vinhqdang commented Dec 30, 2015

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vinhqdang commented Dec 30, 2015

sunformoon commented Dec 30, 2015

vinhqdang commented Dec 30, 2015

sunformoon commented Dec 30, 2015

vinhqdang commented Dec 30, 2015

osdf commented Jan 6, 2016

frankcarey commented Jan 10, 2016

naim commented Jan 14, 2016

inoryy commented Jan 21, 2016

kli-casia commented Feb 20, 2016

yhuanghamu commented Mar 9, 2016

kli-casia commented Mar 9, 2016

yhuanghamu commented Mar 9, 2016

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yhuanghamu commented Mar 9, 2016

fengmei commented Mar 18, 2016

ppuliu commented Apr 1, 2016

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geyang commented Aug 8, 2016 •

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Cannot remove entries from nonexistent #622

Cannot remove entries from nonexistent #622

Comments

vinhqdang commented Dec 26, 2015

vinhqdang commented Dec 26, 2015

sunformoon commented Dec 30, 2015

vinhqdang commented Dec 30, 2015

sunformoon commented Dec 30, 2015

vinhqdang commented Dec 30, 2015

sunformoon commented Dec 30, 2015

vinhqdang commented Dec 30, 2015

sunformoon commented Dec 30, 2015

vinhqdang commented Dec 30, 2015

osdf commented Jan 6, 2016

frankcarey commented Jan 10, 2016

naim commented Jan 14, 2016

inoryy commented Jan 21, 2016

kli-casia commented Feb 20, 2016

yhuanghamu commented Mar 9, 2016

kli-casia commented Mar 9, 2016

yhuanghamu commented Mar 9, 2016

kli-casia commented Mar 9, 2016

yhuanghamu commented Mar 9, 2016

fengmei commented Mar 18, 2016

ppuliu commented Apr 1, 2016

bzamecnik commented Apr 10, 2016

wuyanghere commented Jun 6, 2016

geyang commented Aug 8, 2016 • edited

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ghost commented Oct 13, 2016

geyang commented Aug 8, 2016 •

edited